Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs41266068 chr1:174978933 G/A SERPINC1 chr1:173872942-173886516:- 0.72 8.83 2.0E-17 Box Plot
THCA rs41266072 chr1:174979635 C/T SERPINC1 chr1:173872942-173886516:- 0.73 8.84 1.85E-17 Box Plot
THCA rs41266839 chr6:26409890 G/C ZFP57 chr6:29640169-29648887:- 0.91 7.48 3.61E-13 Box Plot
THCA rs41269265 chr6:27425349 T/C BTN3A2 chr6:26365387-26378548:+ -0.71 -10.76 2.6E-24 Box Plot
THCA rs41269265 chr6:27425349 T/C ZFP57 chr6:29640169-29648887:- 0.78 8.08 5.28E-15 Box Plot
THCA rs41271083 chr5:43653243 C/T UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs41277299 chr22:24085867 G/A IGLL3 chr22:25713888-25716191:+ 0.71 9.25 7.57E-19 Box Plot
THCA rs4128151 chr3:125770302 G/A ROPN1 chr3:123687368-123711025:- -0.34 -6.05 2.99E-9 Box Plot
THCA rs41290241 chr6:151773206 C/G NEK5 chr13:52607747-52703214:- 0.63 7.25 1.69E-12 Box Plot
THCA rs4130071 chr5:170825176 C/T CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs41302131 chr1:151240008 A/G PIPSL chr10:95717948-95721297:- 0.33 5.9 7.01E-9 Box Plot
THCA rs4133429 chr5:45403735 T/C LOC647121 chr1:121260910-121313686:+ 0.35 7.5 3.22E-13 Box Plot
THCA rs41358245 chr2:155016319 A/G FNDC1 chr6:159590429-159693141:+ 0.44 5.98 4.46E-9 Box Plot
THCA rs4142213 chr6:145739870 A/G KIAA0895L chr16:67209505-67217943:- -0.16 -6.14 1.75E-9 Box Plot
THCA rs41432447 chr8:3248756 C/T CSMD1 chr8:2792875-4852494:- -0.52 -5.95 5.12E-9 Box Plot